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This article is part of the supplement: Selected articles from the 4th International Conference on Computational Systems Biology (ISB 2010)

Open Access Report

Integrating multiple types of data to predict novel cell cycle-related genes

Lin Wang1, Lin Hou12, Minping Qian12, Fangting Li14* and Minghua Deng123*

Author Affiliations

1 Center for Theoretical Biology, Peking University, Beijing 100871, China

2 LMAM, School of Mathematical Sciences, Peking University, Beijing 100871, China

3 Center for Statistical Science, Peking University, Beijing 100871, China

4 School of Physics, Peking University, Beijing 100871, China

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BMC Systems Biology 2011, 5(Suppl 1):S9  doi:10.1186/1752-0509-5-S1-S9

Published: 20 June 2011

Additional files

Additional file 1:

48 cell cycle query genes This file can be viewed with Microsoft Excel Viewer.

Format: XLS Size: 21KB Download file

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Additional file 2:

Sensitivity and precision of E-MAP genetic interaction scores This file can be viewed with Microsoft Excel Viewer.

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Additional file 3:

Correlation between our E-MAP data and published data This file can be viewed with Adobe Reader.

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Additional file 4:

Ranks of p-values for top 25 TFs This file can be viewed with Microsoft Excel Viewer.

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Additional file 5:

Cover rate when different TFs are selected This file can be viewed with Adobe Reader.

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Additional file 6:

Cell cycle genes are enriched in the PCCGs and TFs This file can be viewed with Microsoft Excel Viewer.

Format: XLS Size: 264KB Download file

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Additional file 7:

CDC28 substrates are enriched in the PCCGs and TFs

Format: XLS Size: 273KB Download file

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Additional file 8:

Indirect TF-Target connection analysis This file can be viewed with Adobe Reader.

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Additional file 9:

Cluster results of transcriptional network This file can be viewed with Adobe Reader. This file can be viewed with Microsoft Excel Viewer.

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Additional file 10:

Summary of our analytical results This file can be viewed with Microsoft Excel Viewer.

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Additional file 11:

Composition of the signaling E-MAP This file can be viewed with Adobe Reader.

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