Mycorrhizal Metabolome. Solid lines represent enzyme functions identified in annotated transcriptomes, dashed lines represent predicted transfer of metabolites across cell membranes by diffusion (teal lines) or active transport (purple lines) and nodes represent predicted metabolites, inferred by the reactions catalyzed by expressed genes annotated with specific enzyme functions. Nodes bordered in green are predicted for aspen metabolism, nodes bordered in red are predicted for L. bicolor metabolism, and nodes bordered in gray represent metabolites transported across apoplastic space. Edges are highlighted red or green if the represented enzyme function is uniquely expressed by either L. bicolor or aspen respectively. Nodes representing metabolic compounds are highlighted yellow are sugar compounds predicted to be transported by the set of statistically enriched sugar porters in L. bicolor. Nodes highlighted in blue are amino acids, likely transported by the set of statistically enriched amino acid transporters in both L. bicolor and aspen. This figure was generated using Cytoscape v2.6.1 . The network in this figure is available for download as Additional File 1, Data S1.
Larsen et al. BMC Systems Biology 2011 5:70 doi:10.1186/1752-0509-5-70