Effects of parameters on distance measures. (A) Influence of β (from 0.1 to 10 with step 0.1) on shortest path with Gaussian kernel. (B) Influence of γ (from 0.01 to 1 with step 0.01) on diffusion kernel. The small domain-domain interaction network composed of the PDB part of the DOMINE database is used to obtain the results.
Zhang et al. BMC Systems Biology 2011 5:55 doi:10.1186/1752-0509-5-55