Figure 7.

TRN consistency. (A) Digital CTC (digital control) for the four genetic backgrounds. (B) The effective TRN (including only metabolic genes and their regulators) for the double mutant data (fis/hns). The scheme on the right-hand side explains the classification of consistent (checkmark; green link color) and inconsistent (x; orange link color) links. (C) Consistency of the signs of supercoiling-induced gene expression changes with the transcriptional regulatory network.

Sonnenschein et al. BMC Systems Biology 2011 5:40   doi:10.1186/1752-0509-5-40
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