Additional file 1.

Figure S1. Hierarchical clustering identifying gene clusters oppositely regulated across various conditions in the compendium. Shown are log2-ratios of intensities in infected to mock-infected samples for genes whose ratios were non-zero across all the measurements in the compendium. The two clusters of interest are boxed in yellow and enumerated to the right of the heat map. Heat maps were generated using the heatmap2 function from the gplots package in R statistical environment with clustering by Euclidean distance and the complete linkage method.

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Chang et al. BMC Systems Biology 2011 5:202   doi:10.1186/1752-0509-5-202