Table 4

E. coli strain-specific metabolic model information.

Strain

Additions

Deletions

Necessary reactionsa

Total in model


ORFs

Reactions

Isozymes

ORFs

Reactions

ORFs

Reactions


K-12 MG1655

-

-

-

-

-

-

1,339

2,428


K-12 W3110

0

0

0

4

0

0

1,335

2,428


EDL933

38

8

20

51

60

10

1,344

2,376


Sakai

36

8

24

52

61

10

1,345

2,375


CFT073

9

2

25

85

66

9

1,288

2,362


UTI89

8

2

26

71

63

5

1,302

2,367


E. coli pangenome

79

32

255

-

-

-

1,712

2,452


E. coli core

286

184

24

1,053

2,244


aNecessary reactions without an associated gene for in silico models

Baumler et al. BMC Systems Biology 2011 5:182   doi:10.1186/1752-0509-5-182

Open Data