Table 2

E. coli genomes used to construct the pangenome metabolic network.

Strain

ORFs

Genome number


E. coli K-12 MG1655

4,141

1


E. coli EDL933 (EHEC)a

5,196

2


E. coli 53638 (EIEC)b

5,172

3


E. coli CFT073 (UPEC)c

4,889

4


E. coli E2348/69 (EPEC)d

4,652

5


E. coli EC4115 (EHEC)a

5,467

6


E. coli UTI89 (UPEC)c

4,944

7


E. coli E24377A (ETEC)e

4,953

8


E. coli Sakai (EHEC)a

5,253

9


E. coli SE11

4,973

10


E. coli APEC O1 (APEC)f

5,045

11


E. coli SMS-3-5

4,906

12


E. coli 536 (UPEC)b

4,599

13


E. coli HS

4,393

14


E. coli ATCC 8739

4,236

15


E. coli K-12 W3110

4,171

16


Salmonella enterica typhimurium LT2g

4,506

-


aEnterohemorrhagic E. coli (EHEC)

bEnteroinvasive E. coli (EIEC)

cUropathogenic E. coli (UPEC)

dEnteropathogenic E. coli (EPEC)

eEnterotoxigenic E. coli (ETEC)

fAvian pathogenic E. coli (APEC)

gIncluded for comparative purposes

Baumler et al. BMC Systems Biology 2011 5:182   doi:10.1186/1752-0509-5-182

Open Data