Additional file 6.
TCA cycle as represented in each of the five metabolic pathway databases. Breakdown of the TCA cycle per database. WS1) Overview of all reactions, plus corresponding EC numbers and genes. WS2) Reactions of each database; matching reactions are aligned. For reactions that are not part of the TCA cycle consensus an explanation for the differences observed is given in column B (see also section 'Analysis of differences between databases' in the main text). WS3) Metabolites of each database; matching metabolites are aligned. WS4) EC numbers of each database; matching EC numbers are aligned. WS5) Genes of each database; matching genes are aligned. In WS3-WS5 metabolites, EC numbers, and genes are matched across the entire TCA cycle.
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Stobbe et al. BMC Systems Biology 2011 5:165 doi:10.1186/1752-0509-5-165