Additional file 11.

Metabolite counts per database for the comparison of core metabolic processes. For the metabolites of the core metabolic processes in each of the five pathway databases the percentage of metabolites without a chemical formula and the percentage of metabolites without an identifier is indicated. Furthermore, for each pathway database the percentage of metabolites linked to a particular metabolite database (KEGG Compound, KEGG Glycan, ChEBI, PubChem Compound, and CAS) is indicated. We also included the instances of metabolite classes for HumanCyc and members of sets for Reactome, see Materials and Methods.

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Stobbe et al. BMC Systems Biology 2011 5:165   doi:10.1186/1752-0509-5-165