Table 4

Comparison of top 10 early up regulated genes

Genes

GSE11324

GSE3834

GSE5840

GSE9936

Meta


RET

4

6

19

17

1

GREB1

1

1

*

26

2

CXCL12

12

4

*

33

3

MYBL1

3

5

*

85

4

CA12

15

18

48

19

5

IGFBP4

42

*

30

7

6

PMAIP1

20

27

*

14

7

RAPGEFL1

163

*

1

*

8

WWC1

171

32

8

102

9

SGK3

2

19

*

*

10

TUBB2B

*

*

3

*

13

STC2

10

*

*

15

14

EGR3

143

2

*

215

15

NRIP1

9

*

*

44

18

SGK1

5

*

*

347

19

AREG

138

9

24

61

23

MYC

19

7

*

104

24

HSPB8

*

3

56

62

25

PGR

153

*

2

*

29

FADS1

*

*

*

5

30

IL17RB

*

*

*

4

39

PLOD2

6

*

*

131

40

AMD1

7

*

*

*

41

RASGRP1

11

10

*

*

42

TNP2

*

*

7

*

49

MYB

8

*

*

181

57

HOXC4

*

*

*

9

65

CHST8

*

*

6

128

91

SERPINB9

*

*

*

3

113

GP5

*

*

10

*

123

FCGR2B

*

*

4

*

141

TGM2

*

*

5

*

153

TFF1

313

*

*

8

210

TFF2

*

*

9

*

217

HOXC6

*

*

*

1

282

PLAC1

*

*

*

2

290


The column gene includes a union of top 10 regulated genes from individual studies and meta-analysis. The ranks of these genes are indicated in the individual study and in the meta analysis studies. The asterisk * indicates that the gene was not included in the significant list (pfp ≤ 0.05).

Jagannathan and Robinson-Rechavi BMC Systems Biology 2011 5:138   doi:10.1186/1752-0509-5-138

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