Table 1

Selected reaction fluxes used in the model

Reaction

Flux (mM/s)


acetaldehyde transport

0.00141

adenylate kinase

0

alcohol dehydrogenase, reverse rxn (acetaldehyde → ethanol)

1.17

ATPase, cytosolic

0.595

enolase

1.76

ethanol transport

0.0134

fructose-bisphosphate aldolase

0.733

glycerol-3-phosphate dehydrogenase (NAD)

0.149

glycerol-3-phosphatase

0.051

glyceraldehyde-3-phosphate dehydrogenase

1.06

glucose transport (uniport)

0.59

glycerol transport via channel

0.00141

hexokinase (D-glucose:ATP)

0.866

phosphofructokinase

0.606

glucose-6-phosphate isomerase

0.733

phosphoglycerate kinase

0.875

phosphoglycerate mutase

1.76

pyruvate kinase

1.06

pyruvate decarboxylase

1.25

triose-phosphate isomerase

0.395

alpha, alpha-trehalose-phosphate synthase (UDP-forming)

0.04


The data are taken from those models in the BioModels database specific to yeast.

Smallbone et al. BMC Systems Biology 2010 4:6   doi:10.1186/1752-0509-4-6

Open Data