Table 2

P-values for testing association of LOH.

Gene

P-value

FDR

Mutation frequency


NRAP

5.71E-07

6.24E-06

0.1173

MKI67

8.19E-07

4.47E-06

0.1229

C10orf54

1.02E-04

3.70E-04

0.0391

C9orf66

1.63E-04

4.46E-04

0.0419

MYO3A

6.40E-04

1.40E-03

0.0307

PRAME

2.14E-03

3.90E-03

0.0251

EGFR

3.20E-03

4.99E-03

0.0279

IL1RL1

7.11E-03

9.71E-03

0.0196

HLA-DOA

1.30E-02

1.57E-02

0.0168

ABCA13

2.37E-02

2.59E-02

0.0140

CYP1B1

2.37E-02

2.59E-02

0.0140


Dong et al. BMC Systems Biology 2010 4:163   doi:10.1186/1752-0509-4-163

Open Data