Table 1

P-values for testing association of somatic mutations with the GBM.

Gene

p-value

FDR

Mutation frequency


TP53

3.46E-11

5.90E-10

0.1453

PTEN

2.25E-07

1.92E-06

0.0698

EGFR

1.22E-06

6.92E-06

0.0587

FKBP9

1.38E-04

5.89E-04

0.0363

CHEK2

1.39E-03

4.73E-03

0.0475

GSTM5

2.41E-03

6.86E-03

0.0251

DST

4.28E-03

8.12E-03

0.0223

RB1

3.54E-03

8.62E-03

0.0251

NF1

4.17E-03

8.89E-03

0.0363

BCL11A

1.36E-02

2.33E-02

0.0168

ERBB2

1.57E-02

2.43E-02

0.0307

PIK3C2G

2.45E-02

3.49E-02

0.0140

FN1

3.30E-02

4.33E-02

0.0168

COL3A1

4.46E-02

4.75E-02

0.0112


Dong et al. BMC Systems Biology 2010 4:163   doi:10.1186/1752-0509-4-163

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