Table 1 |
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|
Stability regions for methods with bounded relative variance and optimal stability |
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|
Bound (ϵ) |
Stages (s) |
Stability (ls, ϵ) |
Factor vs. τ-leap |
Norm. factor τ-leap |
|
|
||||
|
0.10 |
3 |
3.94566 |
19.73 |
6.58 |
|
5 |
10.1813 |
50.9 |
10.18 |
|
|
|
||||
|
0.25 |
3 |
5.89563 |
14.74 |
4.91 |
|
5 |
11.0001 |
27.5 |
5.5 |
|
|
|
||||
|
0.50 |
3 |
8.12004 |
12.18 |
4.06 |
|
5 |
15.5997 |
23.4 |
4.68 |
|
|
|
||||
|
Factor vs. τ-leap corresponds to the relative increase in the step size with respect to the Poisson τ-leap with the same bound in the variance (ls, ϵ/lτ-leap). Normalised factor vs. τ-leap takes into account the multiple stages of the method (ls, ϵ/(s·lτ-leap)). |
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|
Rué et al. BMC Systems Biology 2010 4:110 doi:10.1186/1752-0509-4-110 |
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