Table 8

GO-based annotation of residual CFinder modules

n

n.ex

ex.mean

cor.mean

mf.mean

bp.mean

cc.mean


Int-1

1496

1348

8.73

0.13

NA

NA

NA

Int-5

7

4

10.71

0.57

0.31

0.35

0.42

Int-6

8

5

8.39

0.39

0.34

0.32

0.54

Int-8

8

8

9.5

0.44

0.5

0.46

0.62

Int-9

8

6

8.68

0.49

0.27

0.46

0.81

Int-10

12

10

8.64

0.41

0.39

0.49

0.61

Int-11

9

9

9.08

0.41

0.42

0.26

0.64

Int-12

11

10

8.84

0.26

0.35

0.36

0.5

Int-14

14

9

8.76

0.4

0.37

0.2

0.67

Int-15

15

9

8.42

0.46

0.55

0.23

0.8

Int-16

14

8

8.42

0.46

0.43

0.21

0.76

Int-17

28

13

12.06

0.6

0.46

0.56

0.49

Int-19

21

9

10.03

0.28

0.4

0.48

0.47

Int-20

18

6

9.07

0.36

0.47

0.34

0.59

Int-21

22

10

9.5

0.12

0.39

0.48

0.47


Lit-1

1141

1081

8.6

0.12

NA

NA

NA

Lit-3

6

6

9.37

0.15

0.69

0.15

0.37

Lit-6

6

6

8.21

0.63

0.55

0.44

0.56

Lit-7

8

5

8.39

0.39

0.34

0.32

0.54

Lit-8

7

5

8.14

0.18

0.76

0.19

0.42

Lit-10

10

10

9.32

0.46

0.35

0.15

0.77

Lit-12

9

9

8.64

0.11

0.22

0.27

0.38

Lit-13

11

10

8.84

0.26

0.35

0.36

0.5


Ortho-1

7

2

8.6

0.5

0.41

0.19

0.57

Ortho-2

4

3

8.34

0.37

0.62

0.22

0.55

Ortho-3

4

3

8.58

-0.18

0.54

0.35

0.7

Ortho-4

4

4

8.65

0.69

0.44

0.45

0.48

Ortho-5

14

10

8.86

0.1

0.34

0.24

0.39

Ortho-6

7

4

10.71

0.57

0.31

0.35

0.42

Ortho-9

8

8

9.5

0.44

0.5

0.46

0.62

Ortho-10

8

6

8.68

0.49

0.27

0.46

0.81

Ortho-11

12

10

8.64

0.41

0.39

0.49

0.61

Ortho-13

58

29

10.81

0.42

0.38

0.47

0.47

Ortho-14

24

7

9.21

0.39

0.45

0.43

0.61

Ortho-15

14

9

8.76

0.4

0.37

0.2

0.67

Ortho-16

39

22

10.67

0.35

0.43

0.49

0.49

Ortho-17

15

9

8.42

0.46

0.55

0.23

0.8

Ortho-19

21

9

10.03

0.28

0.4

0.48

0.47

Ortho-20

18

6

9.07

0.36

0.47

0.34

0.59

Ortho-21

22

10

9.5

0.12

0.39

0.48

0.47


HTP-1

5

5

12.73

0.21

0.55

0.2

0.56

HTP-2

3

3

7.79

0.06

0.78

0.24

0.39

HTP-3

3

2

7.33

0.07

0.46

0.1

1

HTP-4

145

108

8.33

0.06

NA

NA

NA

HTP-5

3

2

7.97

0.05

0.44

0.05

0.29

HTP-6

163

120

8.99

0.15

NA

NA

NA

HTP-7

44

36

8.96

0.16

0.34

0.17

0.44

HTP-8

7

5

8.38

-0.06

0.31

0.12

0.31

HTP-9

5

5

9.16

0.03

0.78

0.36

0.66


GO-based annotation results for CFinder modules. Values in bold font are above the 0.5 threshold. The listed groups have passed less than three thresholds, and thus received a low score.

Marras et al. BMC Systems Biology 2010 4:102   doi:10.1186/1752-0509-4-102

Open Data