Table 1

Location and conservation information of schizophrenia related miRNAs

miRNA

Location (Chr: start-end [strand])

Host genea

Taxonomy conservationb


hsa-let-7g

3: 52277334-52277417 [-]

WDR82

V

hsa-miR-106b

7: 99529552-99529633 [-]

MCM7

V

hsa-miR-181b

hsa-miR-181b-1

1: 197094625-197094734 [-]

Intergenic

V

hsa-miR-181b-2

9: 126495810-126495898 [+]

NR6A1 (antisense)

V

hsa-miR-195

17: 6861658-6861744 [-]

Intergenic

M

hsa-miR-198

3: 121597205-121597266 [-]

FSTL1 (3'UTR)

P

hsa-miR-206

6: 52117106-52117191 [+]

Intergenic

M

hsa-miR-20b

X: 133131505-133131573 [-]

Intergenic

V

hsa-miR-212

17: 1900315-1900424 [-]

Intergenic

V

hsa-miR-24

hsa-miR-24-1

9: 96888124-96888191 [+]

C9orf3

V

hsa-miR-24-2

19: 13808101-13808173 [-]

Intergenic

V

hsa-miR-26b

2: 218975613-218975689 [+]

CTDSP1

V

hsa-miR-29a

7: 130212046-130212109 [-]

AP4M1 (antisense)

V

hsa-miR-29b

hsa-miR-29b-1

7: 130212758-130212838 [-]

AP4M1 (antisense)

V

hsa-miR-29b-2

1: 206042411-206042491 [-]

Intergenic

V

hsa-miR-29c

1: 206041820-206041907 [-]

Intergenic

V

hsa-miR-30a

6: 72169975-72170045 [-]

C6orf155

V

hsa-miR-30b

8: 135881945-135882032 [-]

Intergenic

V

hsa-miR-30d

8: 135886301-135886370 [-]

Intergenic

V

hsa-miR-30e

1: 40992614-40992705 [+]

NFYC

V

hsa-miR-7

hsa-miR-7-1

9: 85774483-85774592 [-]

HNRNPK

A

hsa-miR-7-2

15: 86956060-86956169 [+]

Intergenic

A

hsa-miR-7-3

19: 4721682-4721791 [+]

C19orf30

A

hsa-miR-9

hsa-miR-9-1

1: 154656757-154656845 [-]

C1orf61

A

hsa-miR-9-2

5: 87998427-87998513 [-]

Intergenic

A

hsa-miR-9-3

15: 87712252-87712341 [+]

Intergenic

A

hsa-miR-92a

hsa-miR-92a-1

13: 90801569-90801646 [+]

Intergenic

A

hsa-miR-92a-2

X: 133131234-133131308 [-]

Intergenic

A

hsa-miR-92b

1: 153431592-153431687 [+]

Intergenic

A


aAntisense: miRNA and its host gene are on opposite strand. 3'UTR: miRNA locating on the 3'UTR of its host gene. The remaining miRNAs are in the intron of their host genes.

bTaxonomy conservation: P: primates (human, chimp, rhesus monkey); M: mammals (human, mouse, rat, dog); V: vertebrates (human, mouse, rat, dog, chicken, frog, fish); A: animals (human, mouse, chicken, fish, fly).

Guo et al. BMC Systems Biology 2010 4:10   doi:10.1186/1752-0509-4-10

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