Table 6

Example for the observed transition context Kobs. The rows represent the transitions from state n to the state (n+1) of sample OA1 following TNFα stimulation.

Attribute →

FOS.in

JUN.in

JUNB.in

JUND.in

MMP3.in

...

FOS.out

JUN.out

JUNB.out

JUND.out

MMP3.out

...

Transition ↓


(s0in,s1out)

on

off

off

on

off

...

on

on

on

on

on

...

(s0in,s2out)

on

off

off

on

off

...

off

on

on

on

on

...

(s0in,s4out)

on

off

off

on

off

...

off

off

off

on

on

...

(s0in,s12out)

on

off

off

on

off

...

on

off

off

on

on

...

(s1in,s2out)

on

on

on

on

on

...

off

on

on

on

on

...

...

...

...

...

...

...

...

...

...

...

...

...

...


Wollbold et al. BMC Systems Biology 2009 3:77   doi:10.1186/1752-0509-3-77

Open Data