Table 1

Orf virus NA1/11 and published Parapoxvirus strains used for phylogenetic analysis
Geninfo Identifier (gi) Strain Species of origin Country of origin Genes Reference No. In nMDS
294653624 JS04 Sheep China ORFV011,ORFV059 Liu et al. (2007)[17] 1
336169664 Gansu/2009 Sheep China ORFV011 Zhang et al. (unpublished) 2
269854030 Jilin Sheep China ORFV011, ORFV059 Zhao et al. (2010)[5] 3
323364296 Shanxi Goat China ORFV011, ORFV059 Shi (unpublished) 4
284178603 Hub/2009 Goat China ORFV011 Zhang et al. (2010)[12] 5
336169666 LiaoNing/10 Goat China ORFV011 zhang et al. (unpublished) 6
365266883 Xinjiang Sheep China ORFV011 Lui et al. (unpublished) 7
365266887 Shanxi/11 Goat China ORFV011 Lui et al. (unpublished) 8
NA* NA1/11 Sheep China ORFV011, 059, 109, 110 Present study 9
197344484 Hoping Goat Taiwan ORFV011 Chan et al. (2009)[18] 10
114225403 Natou Goat Taiwan ORFV011 Chan et al. (2007)[10] 11
163860191 Taiping Goat Taiwan ORFV011 Chan et al. (2007)[10] 12
255040176 Korea Goat Korea ORFV011 Oem et al. (2009)[19] 13
82570507 India67/04 Sheep India ORFV011 Hosamani et al. (2006)[11] 14
284159117 Mukteswar/09 Sheep India ORFV011 Veskatesan et al.(unpublished) 15
82570509 India79/04 Sheep India ORFV011 Hosamani et al. (2006)[11] 16
82570503 India82/04 Goat India ORFV011 Hosamani et al. (2006)[11] 17
82570505 India59/05 Goat India ORFV011 Hosamani et al. (2006)[11] 18
371925323 Assam/10 Capra India ORFV011 Bora et al. (unpublished) 19
357595057 Assam/09 Capra India ORFV011 Bora et al. (unpublished) 20
308225028 Muk/2000 Goat India ORFV011 Bora et al. (unpublished) 21
367462731 MT-05 Sheep Brazil ORFV011 Abrahao et al. (unpublished) 22
344050163 NE2 Goat Brazil ORFV011 Abrahao et al. (unpublished) 23
367462733 NE1 Goat Brazil ORFV011 Abrahao et al. (unpublished) 24
344050167 A Goat Brazil ORFV011 Abrahao et al. (unpublished) 25
344050165 D Sheep Brazil ORFV011 Abrahao et al. (unpublished) 26
325073632 D1701 Goat Germany ORFV011, 059, 109, 110 Mayr (1981)[15]; McGuire(2012)[16] 27
74230714 NZ2 Sheep New Zealand ORFV011, 059, 109, 110 Mercer et al. (2006)[13] 28
40019123 OV-SA00 Sheep USA ORFV011, 059, 109, 110 Delhon et al. (2004)[14] 29
40019122 OV-IA82 Sheep USA ORFV011, 059, 109, 110 Delhon et al. (2004)[14] 30
37594893 NA Musk ox USA ORFV011 Guo et al. (2004)[20] 31
37594897 NA Takin USA ORFV011 Guo et al. (2004)[20] 32
37594895 NA Sheep USA ORFV011 Guo et al. (2004)[20] 33
33415066 NA Goat USA ORFV011 Guo et al. (2003)[20] 34
33415068 vaccine Goat USA ORFV011 Guo et al. (2003)[8] 35
345843287 F07.821R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21] 36
345843285 F07.816R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21] 37
345843283 F07.810R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21] 38
345843281 F07.808R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21] 39
345843277 F94.848R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21] 40
345843279 F92.849R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21] 41
345843289 F07.3748S Sheep Finland ORFV011 Hautaniemi et al. (2011)[21] 42
345843291 F09.1160S Sheep Finland ORFV011 Hautaniemi et al. (2011)[21] 43
345843271 F07.801R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21]
255761105 Jodhpur Camel India ORFV011 Lucinda et al. (2010)[22]
295646610 Cam/09 Camel India ORFV011 Venkatesan et al. (unpublished)
345843273 F05.990C Bovine Finland ORFV011 Hautaniemi et al. (2011)[21]
345843275 F10.3081C Bovine Finland ORFV011 Hautaniemi et al. (2011)[21]
345843269 F07.798R Reindeer Finland ORFV011 Hautaniemi et al. (2011)[21]
37594899 PCV NA USA ORFV011 Guo et al. (2004)[20]
37594901 BPSV NA USA ORFV011 Guo et al. (2004)[20]
40019124 BV-AR02 Cattle USA ORFV011, 059, 09, 110 Delhon et al. (2004)[14]

NA: Not available. Virus strains above F07.801R were applied to pairwise distance calculations and nMDS analysis.

Li et al.

Li et al. BMC Veterinary Research 2012 8:229   doi:10.1186/1746-6148-8-229

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