Table 2

Top Ten HGNC named genes with their fold change obtained from the RNAseq data
   HP-PRRSV rJXwn06    US PRRSV VR-2332
Named gene Fold change (log2) Named gene Fold change (log2)
SAA4 ↑9.07171 SAA4 ↑4.15255
RETN ↑6.89887
S100A9 ↑6.41344
XDH ↑5.97329
S100A8 ↑5.75953
ENSSSCG00000013369 ↑5.72684
S100A12 ↑5.37987
IL1R2 ↑4.571
PADI4 ↑4.48918
ENSSSCG00000001617 ↑4.43141
DGAT2 ↓-4.79123 DPT ↓-3.03886
PLIN1 ↓-4.84105 ADRB1 ↓-3.04682
CYP4B1 ↓-5.07721 SLC2A4 ↓-3.06235
ENSSSCG00000002825 ↓-5.11753 MLXIPL ↓-3.07544
LGALS12 ↓-5.31501 TCF15 ↓-3.08758
CIDEC ↓-5.43776 FOXC2 ↓-3.10329
TUSC5 ↓-5.52995 PPP1R1B ↓-3.10611
PPP1R1A ↓-5.64244 KCNQ4 ↓-3.12634
CLEC4G ↓-7.21094 PLXDC1 ↓-3.14039
ENSSSCG00000014888 ↓-7.33358 ADORA1 ↓-3.1413

Miller et al.

Miller et al. BMC Veterinary Research 2012 8:208   doi:10.1186/1746-6148-8-208

Open Data