Table 3

Coxiella burnetii MLVA types observed in 96 animal and 94 environmental samples obtained from 45 dairy farm locations in the Netherlands
C. burnetii MLVA genotype Origin Number of samples Number of repeats
Total Animal Environment MLVA multiplex assay 1 MLVA multiplex assay 2
Ms27 Ms28 Ms34 Ms20b Ms24 Ms31
A Samples 145 (5) 69 76 (5) 3 3 7 7.5 11 3
B Samples 24 11 13 3 3 8 7.5 11 3
C Samples 2 2 0 2 7 8 5 13 3
D Samples 9 9 0 4 5 2 4.5 9 3
E Samples 10 (5) 5 5 (5) 2 7 9 5 13 3
F Samples 5 0 5 2 3 3 7.5 11 3
Nine Mile RSA 493 phase I Cultivation 1 1 0 4 6 5 5 27 5
Nine Mile RSA 493 phase I in silico n.a. n.a. n.a. 4 6 5 5 27 5
Dugway 5 J108-111 in silico n.a. n.a. n.a. 4 4 3 7 4 3
RSA 331 in silico n.a. n.a. n.a. 3 3 3 7,5 6 2
CbuG_Q212 in silico n.a. n.a. n.a. 3 4 2 5 7 4
CbuK_Q154 in silico n.a. n.a. n.a. 4 5 2 4.5 8 3

n.a. = not applicable.

Numbers between brackets indicate samples with both genotype A and E. The calculation of the numbers of repeat units per marker are guided by sequencing results.

de Bruin et al.

de Bruin et al. BMC Veterinary Research 2012 8:165   doi:10.1186/1746-6148-8-165

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