Additional file 5.

Conservation and distance to the closest peptide residue of each PDZ domain site. For each site on the domain, we computed the total sequence weight of the sequences having a particular amino acid at the site. The conservation of the site is defined by the maximum of such total weights normalized by the total sequence weight of all sequences in the MSA. Figure S5.

Format: PDF Size: 22KB Download file

This file can be viewed with: Adobe Acrobat Reader

Yip et al. BMC Biology 2011 9:53   doi:10.1186/1741-7007-9-53