Table 2

Analysis of the Venturia inaequalis genome sequence contigs anchored to the genetic map.

Sequence contigs size (kb)

Total number of sequence contigs

Sequence contigs scored and percentage (%)

Sequence contigs anchored and percentage (%)


< 20

2461

440 (17.9)

353 (14.3)

20-30

243

175 (72.0)

156 (64.2)

30-40

139

111 (79.9)

75 (54.0)

40-50

75

68 (90.7)

54 (72.0)

50-60

60

54 (90.0)

41 (68.3)

60-70

27

26 (96.3)

20 (74.1)

70-80

22

22 (100.0)

17 (77.3)

80-90

15

14 (93.3)

9 (60.0)

90-100

14

14 (100.0)

9 (64.3)

100-110

11

11 (100.0)

10 (90.9)

110-120

5

4 (80.0)

3 (60.0)

120-130

8

7 (87.5)

6 (75.0)

130-140

4

4 (100.0)

3 (75.0)

> 140

4

4 (100.0)

3 (75.0)


The sequence contigs anchored comprise the contigs for which the joint genotype matches the joint genotype of the pre-determined bins and the contigs for which the bins could be placed into the map. The number of sequence contigs scored and anchored is followed by their respective percentage relative to the total number of sequence contigs indicated in the second column.

Celton et al. BMC Biology 2010 8:155   doi:10.1186/1741-7007-8-155

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