Table 1

Sequences used for the phylogenetic analysis of cyanobacteria

Code

Old

New

Spot

Database code

Species


Am1 B0127

BtuB

BtuB

26

gi|158339996

Acaryochloris marina MBIC11017


Am1 3407

CirA

HutA

3

gi|158336543


Am1 3358

CirA

IutA

38

gi|158336494


Am1 A0170

CirA

ViuA

50

gi|158339820


Am1 3383

CirA

ViuA

49

gi|158336519


Am1 A0184

Fiu

FhuA

58

gi|158339834


Am1 A0274

FhuE

FhuA

57

gi|158339535


Am1 A0198

-

FhuA

71

gi|158339845


Am1 A0157

FhuE

FhuA

59

gi|158339807


Am1 3393

FhuE

FhuA

72

gi|158336529


Am1 3398

-

FhuA

65

gi|158336534


Am1 3403

Fiu

FhuA

62

gi|158336539


Ava_B0148

FhuE

FhuA

89

gi|75812430

Anabaena variabilis ATCC 29413


Ava_B0150

CirA

FhuA

88

gi|75812432


Ava_B0159

BtuB

FhuA

82

gi|75812441


Ava_B0185

CirA

ViuA

46

gi|75812467


Ava_B0217

Fiu

BtuB

23

gi|75812499


Ava_B0218

CirA

IutA

42

gi|75812500


Ava_C0010

FhuE

BtuB

27

gi|75812671


Ava_1672

CirA

ViuA

47

gi|75907894


Ava_2840

CirA

FhuA

83

gi|75909052


Ava_4967

BtuB

FhuA

84

gi|75911163


cce3039

CirA

FhuA

54

gi|172037952

Cyanothece sp. CCY0110


glr0280

CirA

?

7

gi|37519849

Gloeobacter violaceus PCC7421


gll0302

CirA

IutA

41

gi|37519871


gll0311

-

FhuA

81

gi|37519880


gll0313

-

FhuA

56

gi|37519882


gll0319

-

FhuA

63

gi|37519888


glr0327

CirA

ViuA

48

gi|37519896


gll0331

FecA

FhuA

69

gi|37519900


gll0343

CirA

IutA

36

gi|37519912


glr0349

FhuE

FhuA

95

gi|37519918


glr0353

-

FhuA

76

gi|37519922


gll0361

FhuE

FhuA

78

gi|37519930


gll0896

FepA

BtuB

22

gi|37520465


gll1276

OMC

BtuB

20

gi|37520845


glr1304

OMC

BtuB

17

gi|37520873


glr1380

-

-

-

gi|37520949


glr1385

-

BtuB

18

gi|37520954


glr1386

CirA

BtuB

15

gi|37520955


gll1452

BtuB

BtuB

25

gi|37521021


glr1488

-

BtuB

12

gi|37521057


glr1610

-

?

8

gi|37521179


glr1909

FhuE

FhuA

73

gi|37521478


gll1962

-

BtuB

16

gi|37521531


glr1973

BtuB

BtuB

29

gi|37521542


gll1978

Fiu

FhuA

93

gi|37521547


glr2051

FepA

?

10

gi|37521620


glr2116

BtuB

BtuB

24

gi|37521685


gll3103

BtuB

BtuB

11

gi|37522672


glr3352

OMCa

BtuB

19

gi|37522921


gll3601

BtuB

BtuB

14

gi|37523170


gll3680

BtuB

?

9

gi|37523249


gll3974

FhuE

FhuA

77

gi|37523543


gll3976

CirA

FhuA

75

gi|37523545


glr4296

CirA

BtuB

13

gi|37523865


NpunF1172

-

BtuB

33

gi|186681644

Nostoc punctiforme PCC73102


NpunF3454

-

FhuA

94

gi|186683610


all1101

-

FhuA

52

gi|17228596

Anabaena sp. PCC 7120


all2148

FhuE

FhuA

66

gi|17229640


all2158

FhuE

FhuA

53

gi|17229650


all2236

Fiu

FhuA

87

gi|17229728


all2610

CirA

FhuA

67

gi|17230102


all2674

Fiu

FhuA

70

gi|17230166


all3310

BtuB

BtuB

21

gi|17230802


all4026

CirA

ViuA

45

gi|17231518


all4924

FhuE

FhuA

61

gi|17232416


alr0397

CirA

IutA

40

gi|17227893


alr2153

CirA

HutA

4

gi|17229645


alr2175

-

FhuA

69

gi|17229667


alr2185

Fiu

FhuA

51

gi|17229677


alr2209

CirA

IutA

44

gi|17229701


alr2211

CirA

FhuA

90

gi|17229703


alr2581

CirA

IutA

43

gi|17230073


alr2588

CirA

FhuA

74

gi|17230080


alr2592

FhuE

FhuA

91

gi|17230084


alr2596

FhuE

FhuA

64

gi|17230088


alr2626

-

FhuA

79

gi|17230118


alr3242

CirA

HutA

5

gi|17230734


alr4028

+alr4029

-

BtuB

32

gi|17231520

gi|17231521


sll1206

IutA

IutA

39

gi|16329186

Synechocystis sp. PCC6803


sll1409

FhuA

FhuA

80

gi|16329191


sll1406

FhuA

FhuA

85

gi|16329194


slr1490

FhuA

FhuA

68

gi|16329201


CYA_1108

BtuB

BtuB

31

gi|86605797

Synechococcus sp.

JA-3-3Ab


CYA_2031

CirA

HutA

1

gi|86606671


CYB_1330

BtuB

BtuB

28

gi|86608804

Synechococcus sp.

JA-2-3B'a(2-13)


CYB_2727

CirA

HutA

2

gi|86610153


SynpA0637

BtuB

BtuB

30

gi|170077260

Synechococcus sp. PCC 7002


SynpG0081

CirA

HutA

6

gi|170076551


SynpG0006

CirA

IutA

35

gi|170076476


SynpG0138

CirA

IutA

37

gi|170076608


SynPG0089

FhuE

FhuA

55

gi|170076568


SynpG0103

FhuA

FhuA

86

gi|170076573


Nspu20875

CirA

FhuA

92

gi|119508873

Nodularia spumigena

CCY9414


Nspu21611

CirA

IutA

43

gi|119509643


Cwat6206*

-

FhuA

1

gi|67920343

Crocosphaera watsonii WH8501


The annotation of the sequences is indicated in column 1, the spot number according to Figure 3 is indicated in column 4; the initial annotation in the database is given in column 2; the classification according to Figure 3 using the name of a representative transporter of the related category is given in column 3; the accession code in column 5; and the source organism column 6.

a(OMC, outer membrane channel; '*', incomplete sequence; '?', no clear assignment possible).

Mirus et al. BMC Biology 2009 7:68   doi:10.1186/1741-7007-7-68

Open Data