Table 1 |
||||
|
COI DNA barcodes of varied lengths and comparable fragments of cytb are capable of identifying mammalian species in test assemblage of 1585 individuals from 121 species. |
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|
Length |
% Res |
% K2P |
% Var |
|
|
|
||||
|
COI |
||||
|
Full gene |
1557 |
100 |
14.9 |
56.3 |
|
Standard barcode |
654 |
96.7 |
14.8 |
55.8 |
|
Mini-barcode 1 |
109 |
93.3 |
19.7 |
61.5 |
|
Mini-barcode 2 |
109 |
95 |
11.7 |
51.4 |
|
Mini-barcode 3 |
109 |
93.3 |
15.8 |
57.8 |
|
Mini-barcode 4 |
109 |
95 |
16.7 |
56.0 |
|
Mini-barcode 5 |
109 |
96.7 |
13.5 |
54.1 |
|
Mini-barcode 6 |
109 |
95 |
12.6 |
54.1 |
|
cytb |
||||
|
Full gene |
1149 |
100 |
16.9 |
69.3 |
|
Barcode size |
654 |
98.3 |
15.9 |
65.9 |
|
Mini-barcode 1 |
109 |
95 |
15.7 |
67.9 |
|
Mini-barcode 2 |
109 |
93.3 |
17.3 |
65.1 |
|
Mini-barcode 3 |
109 |
96.7 |
16 |
68.8 |
|
Mini-barcode 4 |
109 |
95 |
13.8 |
58.7 |
|
Mini-barcode 5 |
109 |
95 |
15.3 |
65.1 |
|
Mini-barcode 6 |
109 |
95 |
18.2 |
69.7 |
|
|
||||
|
Res, resolution in neighbor-joining analysis [13]; K2P, genetic distances based on Kimura two-parameter nucleotide substitution model [20]; var, variable sites. |
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|
Hajibabaei et al. BMC Biology 2007 5:24 doi:10.1186/1741-7007-5-24 |
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