Additional file 4.
Table of detection rates for all methylated motifs in E.coli MG1655. The number and percent detection is shown for all methylated sequence motifs in the genome. A detected genomic position is one that has a kinetic score that is greater than the cutoff value. Detection rates are also shown for common secondary IPD ratio peaks of 6mA (+5) and 5mC (+2, +6) and for off-target motifs with similar sequence content to the methylated motifs. Methylated bases are colored: 6mA (red), 5mC (blue). The interrogated base in the motif is underlined. Unassigned are genomic positions with kinetic scores above the cutoff which are not in a methylated motif or a secondary peak.
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Clark et al. BMC Biology 2013 11:4 doi:10.1186/1741-7007-11-4