Table 4

Confidence score of predicted Enzyme Commission numbers

Evaluation method

Criteria

Points


Confidence score of homologous Swiss-Prot hit for EC number transfer

≥ 6 and < 8

1


≥ 8 and < 10

2


≥ 10

3


Consensus bonus

If the EC number is assigned for at least three different Swiss-Prot hits

1


Ezypred prediction (no confidence assigned to prediction)

If the EC number agrees with the prediction of Ezypred

2


EFICAz prediction confidence

Low confidence prediction

2


0.6 to 0.7

2.5


0.7 to 0.8

3


0.8 to 0.9

3.5


0.9 to 1

4


Cong and Grishin BMC Biology 2012 10:82   doi:10.1186/1741-7007-10-82

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