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MESSA: MEta-Server for protein Sequence Analysis

Qian Cong1 and Nick V Grishin12*

Author Affiliations

1 Departments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, 5223 Harry Hines Boulevard, Dallas, TX 75390-9050, USA

2 Howard Hughes Medical Institute, University of Texas Southwestern Medical Center, 5223 Harry Hines Boulevard, Dallas, TX 75390-9050, USA

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BMC Biology 2012, 10:82  doi:10.1186/1741-7007-10-82

Published: 2 October 2012

Additional files

Additional file 1:

Function annotations of the Ca. L. asiaticus proteins. This file contains the annotations of the Ca. L. asiaticus proteins from NCBI, SEED and the information provided by us on the basis of MESSA results and manual curation. When MESSA offers updated or modified annotations, the updated annotations are highlighted in green and the original SEED or NCBI annotations are highlighted in yellow.

Format: PDF Size: 1.3MB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 2:

Curation of proteins predicted to be secreted by the Sec pathway. This file contains proteins that are predicted to have signal peptides by computer programs. For each protein, the evidence to support or refute the prediction and the final judgment after manual curation is listed.

Format: PDF Size: 261KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data