A structural model of R.Hpy188I (A and B) compared to its experimentally characterized homologs (C and D). Coordinates of the R.Hpy188I model are available for download from the FTP server ftp://genesilico.pl/iamb/models/R.Hpy188I/ webcite (A) R.Hpy188I with the homology-modeled part colored according to secondary structure (helices in red, strands in yellow, loops in grey) and regions modeled de novo shown in cyan. (B) R.Hpy188I model colored according to the MetaMQAP score. Reliable regions are colored blue, less reliable regions are colored green (predicted deviation from the native structure ~3 Å) unreliable regions are colored yellow to red. (C) GIY-YIG domain in I-TevI (1mk0). (D) GIY-YIG domain in UvrC (1yd0).
Kaminska et al. BMC Structural Biology 2008 8:48 doi:10.1186/1472-6807-8-48