Peptide binding prediction for the human class II MHC allele HLA-DP2: a molecular docking approach
1 Rebirth, Hannover Biomedical Research School, Carl-Neuberg st 1, 30625 Hannover, Germany
2 School of Pharmacy, Medical University of Sofia, 2 Dunav st., 1000 Sofia, Bulgaria
3 Life and Health Sciences, Aston University, Aston Triangle, Birmingham, B4 7ET, UK
BMC Structural Biology 2011, 11:32 doi:10.1186/1472-6807-11-32Published: 14 July 2011
Additional file 1:
Test set of known HLA-DP2 binders. The file contains a test set of 457 known peptide binders to HLA-DP2, parent protein NCBI GI numbers and IC50 values.
Format: XLS Size: 47KB Download file
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Additional file 2:
DS-QMnpp for HLA-DP2 binding prediction of 13 mer peptides. The file contains the DS-QMnpp for HLA-DP2 binding prediction of 13 mer peptides. Binding scores are normalized position per position. Non-binding amino acids were assigned a binding score of -10.000.
Format: DOC Size: 158KB Download file
This file can be viewed with: Microsoft Word Viewer