Table 1

Primers and PCR conditions used in BACH1 mutation analysis.

Exon
Strand
Primer name
Nucleotide sequence (5'→3')
Amplicon lenght (bp)
Annealing temperature (°C)

2
Forward
Ex2F
CTGTTTCCAGATTTCTCCC



Reverse
Ex2R
GTGAACCCAGAAAATATTCTCC
331
58
3
Forward
Ex3F
CCCTGGAGTGCAATCTCACT



Reverse
Ex3RN
TAGCGACAGCATGGCTGAA
319
48
4
Forward
Ex4F
CCTGGGTGAACTGGGCTGTAG



Reverse
Ex4RN
TAACAGTAATAATTAAGACTC
316
48
5
Forward
Ex5FN
TTGCCTACCTGTAAGTTATTTATG



Reverse
Ex5RN
ACCATGTTCAGCTGTAACTAACTG
233
60
6
Forward
Ex6F
GAGCTGTTTTGGCCTTTGAGA



Reverse
Ex6RN
CTGAGTGGGTTGCTACTGTCCT
317
55
7
Forward
Ex7F
GTTCTGATTCCATGTGAGGTT



Reverse
Ex7R
GTACATATAAAACACATACTGAGT
448
55
8
Forward
Ex8F
GATGTTCCTCAAATTCTGAGATAA



Reverse
Ex8R
CATCTAAAAGCTTTTACATTCAAC
386
55
9
Forward
Ex9F
GCCTATAGTGTGAATTTTAAAATG



Reverse
Ex9R
CCTAGTTAACCAAAGTTTACTAAC
395
55
10
Forward
Ex10F
GATCAACGCATGACAATAATGATG



Reverse
Ex10R
GGGTTACTCACTAGATTTAATCTG
320
55
11
Forward
Ex11F
GCATGTTTTGTTGGGTTTCATTGT



Reverse
Ex11R
GGTATGTATTAAACACATGCTAGC
326
55
12
Forward
Ex12F
GTACCAGCTCTTTCAAATGAG



Reverse
Ex12R
CTATCTTTAAAAGAGTCAACCAC
360
55
13
Forward
Ex13FN
GTGCTGGGATTACAGGTGTGAGCCA



Reverse
Ex13RN
ACTTGCTGGCACTTCAGGTATCTTC
317
60
14
Forward
Ex14F
CTTGTTGCTTGATCTTTTATGTAC



Reverse
Ex14R
CTAGGAAGCTTACTGTGGTAA
356
55
15
Forward
Ex15FN
ACAGCTCTATGAGATATATTG



Reverse
Ex15RN
TCATAGGAGAACAAGTACAAT
504
55
16
Forward
Ex16FN
TTACTTAAAGACATTGAACTT



Reverse
Ex16RNN
CACTATAAAAGCAAAGCGC
392
54
17
Forward
Ex17FN
CTGTTAGAAGTTAATATGATG



Reverse
Ex17RN
GAATACATACCAGTTCCTATG
325
55
18
Forward
Ex18F
CCAATTTTCTGTCTGTCCCAC



Reverse
Ex18R
GATAGTAGAGCTCATGTTATGTG
254
55
19
Forward
Ex19F
CTTCACTAGAAAAAGCAAGTG



Reverse
Ex19R
CCACCATATTTAAGGAATTAATC
523
48
20A
Forward
Ex20AFN
ACCTAGCAATTATGTTAGCT



Reverse
Ex20ARN
TCTGTATCTTCAGGATCGTA
584
48
20B
Forward
Ex20BFN
ATTGATGCCACCCTTACTA



Reverse
Ex20BRNN
TAACATAAGCATGATGACATA
565
54

Vahteristo et al. BMC Cancer 2006 6:19   doi:10.1186/1471-2407-6-19