Table 1

Top genes overexpressed in the fibroblastic signature (see text for designation with boldface and underline)

Rank

Probe set

Gene

Rank

Probe set

Gene

1

37892_at

COL11A1

33

202998_s_at

LOXL2

2

203083_at

THBS2

34

201438_at

COL6A3

3

217428_s_at

COL10A1

35

209596_at

MXRA5

4

221729_at

COL5A2

36

213764_s_at

MFAP5

5

210511_s_at

INHBA

37

204589_at

NUAK1

6

213909_at

LRRC15

38

217762_s_at

RAB31

7

212488_at

COL5A1

39

201150_s_at

TIMP3

8

204619_s_at

VCAN

40

221541_at

CRISPLD2

9

209955_s_at

FAP

41

205422_s_at

ITGBL1

10

202311_s_at

COL1A1

42

207173_x_at

CDH11

11

203878_s_at

MMP11

43

213338_at

TMEM158

12

210809_s_at

POSTN

44

202363_at

SPOCK1

13

202404_s_at

COL1A2

45

204051_s_at

SFRP4

14

202952_s_at

ADAM12

46

202283_at

SERPINF1

15

215076_s_at

COL3A1

47

209335_at

DCN

16

215446_s_at

LOX

48

219655_at

C7orf10

17

210495_x_at

FN1

49

219561_at

COPZ2

18

201792_at

AEBP1

50

219773_at

NOX4

19

212353_at

SULF1

51

204464_s_at

EDNRA

20

202766_s_at

FBN1

52

200974_at

ACTA2

21

219087_at

ASPN

53

202273_at

PDGFRB

22

200665_s_at

SPARC

54

61734_at

RCN3

23

202450_s_at

CTSK

55

213139_at

SNAI2

24

206026_s_at

TNFAIP6

56

220988_s_at

C1QTNF3

25

222020_s_at

HNT

57

205713_s_at

COMP

26

206439_at

EPYC

58

201105_at

LGALS1

27

201069_at

MMP2

59

213869_x_at

THY1

28

205479_s_at

PLAU

60

202465_at

PCOLCE

29

218469_at

GREM1

61

209156_s_at

COL6A2

30

201261_x_at

BGN

62

221447_s_at

GLT8D2

31

213125_at

OLFML2B

63

204114_at

NID2

32

201744_s_at

LUM

64

205991_s_at

PRRX1

Anastassiou et al. BMC Cancer 2011 11:529   doi:10.1186/1471-2407-11-529