Open Access Highly Accessed Research article

Human cancer cells express Slug-based epithelial-mesenchymal transition gene expression signature obtained in vivo

Dimitris Anastassiou26*, Viktoria Rumjantseva6, Weiyi Cheng26, Jianzhong Huang6, Peter D Canoll3, Darrell J Yamashiro135 and Jessica J Kandel145*

Author Affiliations

1 Institute for Cancer Genetics, Columbia University, New York, NY, USA

2 Center for Computational Biology and Bioinformatics, Columbia University, New York, NY, USA

3 Department of Pathology and Cell Biology, Columbia University, New York, NY, USA

4 Department of Surgery, Columbia University, New York, NY, USA

5 Department of Pediatrics, Columbia University, New York, NY, USA

6 Department of Electrical Engineering, Columbia University, New York, NY, USA

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BMC Cancer 2011, 11:529  doi:10.1186/1471-2407-11-529

Published: 30 December 2011

Additional files

Additional file 1:

Heat map of breast cancer data set This file contains the heat map of the TCGA breast cancer data set for the genes of the mesenchymal transition signature.

Format: PDF Size: 127KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 2:

Heat map of colon cancer data set This file contains the heat map of the TCGA colon cancer data set for the genes of the mesenchymal transition signature.

Format: PDF Size: 66KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 3:

Heat map of Ewing's sarcoma data set This file contains the heat map of a Ewing's sarcoma data set (GEO accession number GSE12102) for the genes of the mesenchymal transition signature.

Format: PDF Size: 52KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 4:

Heat map of lung cancer data set This file contains the heat map of the TCGA lung cancer data set for the genes of the mesenchymal transition signature.

Format: PDF Size: 71KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 5:

Heat map of ovarian cancer data set This file contains the heat map of the TCGA ovarian cancer data set for the genes of the mesenchymal transition signature.

Format: PDF Size: 287KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 6:

Heat map of neuroblastoma data set This file contains the heat map of a neuroblastoma data set (GEO accession number GSE3960) for the genes of the mesenchymal transition signature.

Format: PDF Size: 73KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 7:

Heat map of leukemia data set This file contains the heat map of the TCGA leukemia data set for the genes of the mesenchymal transition signature.

Format: PDF Size: 100KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data