Table 2

Identification of α(1,6)fucosylated proteins by mass spectrometry

Protein

Band n°

Mr (kDa)

NCBInr Swiss-Prot accession n°

Function

Score

Coverage rate (%)


Glucose regulated glycoprotein of 94 kDa

5

92.7

B4DHT9

Stress response/chaperone

743

20


Polymeric immunoglobulins receptor

5

84.4

PO1833

Immune response

383

10


Vascular adhesión protein 1

5

85.1

Q16853

Cell adhesion molecule/Immune response

361

11


Fibulin-1 C

5

78.5

P23142-4

Extracellular matrix component/cell adhesion and migration

339

12


Platelet glycoprotein IIIa

5

87.4

PO5106

Cell adhesion molecule/Immune response

156

5


IgG Fc binding protein

8

59.6

Q9Y6R7

Cell adhesion molecule/Immune response

1320

6


Unknown protein product

8

53.8

Q6ZVX0

unknown

343

24


Immunoglobulin G B12, heavy chain

8

51.2

gi|15825648

Cell adhesion molecule/Immune response

272

16


Immunoglobulin α-1, constant region

8

54.3

P01876

Cell adhesion molecule/Immune response

248

14


Each protein score represents the sum of the score of each ion protein analyzed and this is, in turn considered numerically as -10 * log (p), where p is the probability that the matching was made randomly and coverage rate (%) represents the percentage of the total protein sequence that overlap with the peptide fragments.

Muinelo-Romay et al. BMC Cancer 2011 11:508   doi:10.1186/1471-2407-11-508

Open Data