|
Haplotypes and haplotype frequencies in haploblock 1 as defined by default settings using Haploview version 3.2 |
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| Haplotype block association |
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| Haplotype |
Haploblock 1 |
MAF |
Chi-square |
p-value |
|
|
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| GAAT |
Haplotype A |
0.35 |
0.13 |
0.72 |
| GCAT |
Haplotype B |
0.34 |
0.18 |
0.67 |
| AAGC |
Haplotype C |
0.28 |
0.01 |
0.93 |
| AAGT |
Haplotype D |
0.02 |
0.35 |
0.55 |
|
Highly polymorphic markers were used for single marker (table 1) and haplotype association analysis. MAF-Minor allele frequency. P-values calculated using 10 000 permutations. | ||||
Myhre et al. BMC Medical Genetics 2008 9:19 doi:10.1186/1471-2350-9-19 |
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