Table 1

Analysis of the PTPN22 C1858T variant in the Spanish cohort


Genotypes (%)
Alleles (%)
Subjects
CC
CT
TT
C
T

Controls (n = 554)
483 (87.2)
68 (12.3)
3 (0.5)
1034 (93.3)
74 (6.7)
     Female (n = 197)
172 (87.3)
23 (11.7)
2 (1.0)
367 (93.1)
27 (6.9)
     Male (n = 189)
168 (89.9)
20 (10.6)
1 (0.5)
356 (94.2)
22 (5.8)






Cases (n = 316)
252 (79.7)
59 (18.7)
5 (1.6)
563 (89.1)
69 (10.9)
     Female (n = 159)
122 (76.7)
33 (20.8)
4 (2.5)
277 (87.1)
41 (12.9)
     Male (n = 157)
130 (82.8)
26 (16.1)
1 (0.6)
286 (91.1)
28 (8.9)

Patients vs. controls:

T vs. C; OR (95%) = 1.71 (1.20–2.45); p = 0.002

(TT+CT) vs. CC; OR (95%) = 1.73 (1.17–2.54); p = 0.004

Santiago et al. BMC Medical Genetics 2007 8:54   doi:10.1186/1471-2350-8-54