|
Allele (major) and genotype (major homozygote, heterozygote) frequencies for identified SNPs by resequencing in Estonian and Czech normotensives and hypertensives |
||||||
| SNPa |
dbSNP |
Alleleb/Genotype |
Estonians |
Czech |
||
| Normotensives |
Hypertensives |
Normotensives |
Hypertensives |
|||
|
|
||||||
| SNP-702 |
NA |
G |
1 |
1 |
0.96 |
0.98 |
| 5'UTR |
GG |
1 |
1 |
0.92 |
0.96 |
|
| GA |
0 |
0 |
0.08 |
0.04 |
||
| SNP-591 |
NA |
G |
0.96 |
0.96 |
0.98 |
0.88 |
| 5'UTR |
GG |
0.92 |
0.92 |
0.96 |
0.88 |
|
| GT |
0.08 |
0.08 |
0.04 |
0 |
||
| SNP-390 |
NA |
A |
0.60 |
0.70 |
0.85 |
0.675 |
| 5'UTR |
AA |
0.44 |
0.40 |
0.79 |
0.45 |
|
| AG |
0.32 |
0.60 |
0.125 |
0.45 |
||
| SNP-184 |
rs876493 |
A |
0.60 |
0.58 |
0.66 |
0.54 |
| 5'UTR |
AA |
0.40 |
0.24 |
0.44 |
0.20 |
|
| GA |
0.40 |
0.68 |
0.44 |
0.68 |
||
| SNP+360 |
rs200173 |
G |
0.98 |
1 |
0.96 |
0.96 |
| Intron 1 |
GG |
0.96 |
1 |
0.92 |
0.92 |
|
| AG |
0.04 |
0 |
0.08 |
0.08 |
||
| SNP+1520 |
rs5638 |
A |
0.94 |
0.96 |
0.94 |
0.96 |
| Exon 3 |
AA |
0.92 |
0.92 |
0.88 |
0.92 |
|
| AG |
0.04 |
0.08 |
0.12 |
0.08 |
||
| SNP+1587 |
NA |
G |
0.98 |
1 |
1 |
0.98 |
| Exon 3 |
GG |
0.96 |
1 |
1 |
0.96 |
|
| AG |
0.04 |
0 |
0 |
0.04 |
||
|
alocation relative to ATG; bmajor allele frequency; NA-not available | ||||||
Kepp et al. BMC Medical Genetics 2007 8:47 doi:10.1186/1471-2350-8-47 |
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