Table 5

Genotype frequencies of rs5148417 and rs5148418 in non-del patients (n = 199), controls (n = 139) and Han Chinese in 1000 Genome Project (n = 197)

SNP

Genotype frequency (%(n))

Genotype frequency (%(n))


Non-del

control

control

1000GPD


rs5748417

TT

48.7(97)

35.3(49)

35.3(49)

44.2(87)

TC

39.7(79)

47.5(66)

47.5(66)

43.7(86)

CC

11.6(23)

17.3(24)

17.3(24)

12.2(24)

HWE_P

0.801

1.000

1.000

0.975

χ2

6.522

3.337

*P(df = 2)

0.038

0.189

rs5748418

GG

50.3(100)

35.3(49)

35.3(49)

44.2(87)

GA

40(80)

47.5(66)

47.5(66)

43.7(86)

AA

9.5(19)

17.3(24)

17.3(24)

12.2(24)

HWE_P

1.000

1.000

1.000

0.975

χ2

9.013

3.337

*P(df = 2)

0.011

0.189


* P-values were calculated using Fisher's exact test.

Xu et al. BMC Medical Genetics 2011 12:169   doi:10.1186/1471-2350-12-169

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