Table 2

Characterization of MSSA from Nigeria by antibiotic resistance pattern, detection of genes and molecular typing
Isolate No Location Sample Or Clinical Diagnosis Antibiotype tuf gene dfrA gene PVL gene spa type MLST (ST) Clonal Complex (CC)
1229 Maiduguri GTI TET + ND - t311 ST5 CC5
652 Maiduguri Not available PEN, COT + - + t311
47 Lagos1 Leg Ulcer PEN, TET, CIP, MOX, COT + - - t064 CC8
54 Lagos1 SLE PEN, TET, COT, CIP + - - t064
49 Lagos1 Nasal swab/screening PEN, COT + - - t2331** ST8
10 Ogbomosho SSI PEN + ND + t084 CC15
62 Lagos1 UTI COT + - - t084
076 Maiduguri Not available PEN, TET, COT + - - t084
373 Maiduguri UTI COT, TET + - - t084** ST15
1253 Maiduguri SSI PEN, TET, COT + - - t084
2290 Maiduguri SSI PEN, TET, COT + - - t084
2696 Maiduguri Semen (Infertility) PEN, COT + - - t084
1038 Maiduguri SSI PEN, COT + - + t2216
2478 Maiduguri UTI PEN, TET, COT + - - t2216
6B Ogbomosho Septicaemia COT + - + t318 ST30 CC30
51 Lagos1 Nasal swab/screening PEN, COT + - - t318
1059 Maiduguri GTI COT + - - t318
2578 Maiduguri GTI PEN, TET, COT + - + t934 ST80 CC80
56 Lagos1 Otitis media PEN, COT + - - t159 ST121 CC121
67 Lagos1 Nasal swab/screening PEN, TET, COT + - + t2304
68 Lagos1 Nasal swab/screening PEN, TET, COT + - + t2304
006 Maiduguri Septicaemia PEN, TET, COT + - + t355** ST152 singleton
0017 Maiduguri Septicaemia PEN, TET, COT + - + t355
1097 Maiduguri SSI PEN, TET, COT + - + t355
2365 Maiduguri Semen (Infertility) PEN, COT + - + t355
259 Maiduguri Semen (Infertility) PEN, COT + - + t355
604 Maiduguri SSI PEN, TET, COT + - - t355
642 Maiduguri SSI PEN, TET + ND + t9008**
829 Maiduguri SSI PEN, TET + ND - t9008
J11 Jos Septicaemia PEN, TET, COT + - + t355
J13 Jos Septicaemia PEN, TET, COT + - + t355
61 Lagos1 SSI TET, COT + - + t8987**
64 Lagos1 Nasal swab/screening PEN + ND - t1510 ST508 CC45
55 Lagos1 CSOM PEN + ND - t8223 ND CC45
57 Lagos1 Haematoma Susceptible to all antibiotics + ND - t635 ND ND
70 Lagos1 Nasal swab/screening PEN, TET, COT + - - NT ND ND

KEY:

: Nasal samples of health care workers (HCWs) in one of the hospitals in Lagos (designated as Lagos1).

GTI: Genital Tract Infection; SLE: systemic lupus erythematosus; SSI: Skin and soft tissue infection; UTI: Urinary Tract Infection; CSOM: Chronic suppurative otitis media.

Antibiotics - PEN: Penicillin; TET: Tetracycline; CIP: Ciprofloxacin; MOX: Moxifloxacin; COT: Cotrimoxazole.

ND: Not determined; NT: Non-typeable.

Spa types (bold) are new types; Isolates with spa type t064, t159, t311, t318, t934, 1510, t2216 and t2304 were assigned STs based on the Based Upon Repeat Pattern (BURP) via the Ridom StaphType software. **: MLST on representative strains.

Shittu et al.

Shittu et al. BMC Infectious Diseases 2012 12:286   doi:10.1186/1471-2334-12-286

Open Data