Table 8

Details of sex-adjusted haplotype frequency analysis for 2-SNP, 3-SNP, and 4-SNP windows showing the most significant results among all possible sliding windows
HCV-1
Haplotypes RVR (+) RVR (−) OR Pvalue
rs10907185-rs6603797 (S1-S2)
OMNIBUS - - - 0.0208*
AC 0.2 0.1158 1.91 0.0078*
rs6603797-rs4648727-rs12126768 (S2-S3-S4)
OMNIBUS - - - 0.054
CAT 0.1157 0.0673 1.81 0.0524
rs10907185-rs6603797-rs4648727-rs12126768 (S1-S2-S3-S4)
OMNIBUS - - - 0.0397*
ACAT 0.1163 0.0615 2.01 0.0261*
HCV-2
Haplotypes RVR (+) RVR (−) OR Pvalue
rs4648727-rs12126768 (S3-S4)
OMNIBUS - - - 0.0546
AT 0.1139 0.0278 4.50 0.0265*
rs6603797-rs4648727-rs12126768 (S2-S3-S4)
OMNIBUS - - - 0.1099
CAT 0.1139 0.0278 4.50 0.0265*
rs10907185-rs6603797-rs4648727-rs12126768 (S1-S2-S3-S4)
OMNIBUS - - - 0.1585
ACAT 0.1149 0.0278 4.54 0.0253*

Lim et al.

Lim et al. BMC Gastroenterology 2012 12:167   doi:10.1186/1471-230X-12-167

Open Data