Table 1

List of differentially regulated OsWRKY genes upon pathogen and osmotic stress

Trm

Name

R

M

A

P. Value

Trm

Name

R

M

A

P. Value


M. grisea crabgrass (BR29)

OsWRKY18

1.547

0.629

8.684

3.42E-06

Leaves Osmotic 5 hours

OsWRKY4

0.569

-0.813

9.319

5.11E-10



OsWRKY61

1.426

0.511

10.493

2.56E-05

OsWRKY18

0.419

-1.256

8.771

1.13E-08



OsWRKY4

1.329

0.410

9.385

7.82E-05

OsWRKY61

0.736

-0.443

10.770

3.46E-05



OsWRKY71

2.075

1.053

7.332

8.35E-04

OsWRKY37

0.777

-0.364

11.870

1.99E-03



OsWRKY19

1.304

0.383

11.830

8.74E-04

OsWRKY87

0.807

-0.309

9.781

2.90E-03



OsWRKY112

1.326

0.407

12.200

1.57E-03

OsWRKY19

0.832

-0.265

12.135

2.90E-03



OsWRKY27

1.208

0.273

12.453

1.57E-03

OsWRKY112

0.756

-0.404

12.640

5.02E-03



OsWRKY6

1.251

0.323

10.882

3.24E-03

OsWRKY110

0.787

-0.346

7.642

8.27E-03



OsWRKY90

1.408

0.494

7.442

8.87E-03

OsWRKY40

0.842

-0.248

9.187

2.42E-02



OsWRKY100

0.816

-0.294

12.756

3.15E-02

OsWRKY63

0.850

-0.234

8.670

4.97E-02



OsWRKY37

1.180

0.238

11.520

4.13E-02

OsWRKY43

1.206

0.270

11.571

7.24E-02



OsWRKY44

0.815

-0.296

7.956

4.67E-02

OsWRKY20

0.812

-0.300

8.904

7.46E-02



OsWRKY43

0.799

-0.324

11.214

4.76E-02

OsWRKY14

0.874

-0.194

9.003

7.63E-02



OsWRKY20

1.367

0.451

8.931

5.06E-02

OsWRKY42

0.864

-0.211

10.513

8.57E-02


OsWRKY42

1.193

0.255

10.249

6.45E-02

Roots Osmotic 1 hour

OsWRKY64

1.269

0.343

14.766

7.97E-04



OsWRKY96

1.301

0.380

6.908

8.05E-02

OsWRKY19

1.469

0.555

11.659

1.67E-03



M. oryzae wheat (BR32)

OsWRKY18

1.468

0.554

9.011

2.68E-05

OsWRKY31

0.606

-0.723

8.649

6.29E-03



OsWRKY40

1.396

0.481

9.326

2.68E-05

OsWRKY69

1.799

0.847

8.030

6.86E-03



OsWRKY4

1.360

0.444

9.563

8.05E-05

OsWRKY61

1.512

0.597

10.079

1.14E-02



OsWRKY108

1.399

0.485

8.593

8.05E-05

OsWRKY33

1.266

0.340

11.102

1.49E-02



OsWRKY100

0.707

-0.500

12.407

1.38E-03

OsWRKY96

1.350

0.433

8.881

1.66E-02



OsWRKY87

1.253

0.325

9.493

1.38E-03

OsWRKY112

1.491

0.577

12.354

3.81E-02



OsWRKY43

0.705

-0.505

11.178

1.38E-03

OsWRKY85

1.157

0.210

10.115

3.81E-02



OsWRKY64

0.777

-0.365

13.627

1.38E-03

OsWRKY37

1.373

0.458

11.500

3.81E-02



OsWRKY19

1.245

0.316

11.556

4.24E-03

OsWRKY1

0.725

-0.464

7.044

3.81E-02



OsWRKY112

1.345

0.427

11.932

5.89E-03

OsWRKY100

1.206

0.271

12.977

3.81E-02



OsWRKY61

1.177

0.235

10.309

1.66E-02

OsWRKY18

1.543

0.626

8.633

4.54E-02



M. oryzae rice (FR13)

OsWRKY4

1.471

0.557

10.546

8.26E-05

OsWRKY27

1.406

0.492

12.147

4.87E-02


OsWRKY53

0.627

-0.673

9.566

7.05E-04

Roots Osmotic 5 hours

OsWRKY100

1.330

0.411

13.325

3.08E-03



OsWRKY108

1.323

0.404

9.194

8.20E-04

OsWRKY87

0.777

-0.364

9.850

3.08E-03



OsWRKY115

1.591

0.670

9.389

8.20E-04

OsWRKY78

1.386

0.471

7.519

4.89E-03



OsWRKY63

1.453

0.539

9.751

1.10E-03

OsWRKY43

1.181

0.240

11.126

1.60E-02



OsWRKY61

1.321

0.402

11.260

2.68E-03

OsWRKY20

1.340

0.423

9.206

2.40E-02



OsWRKY24

1.346

0.429

10.918

4.53E-03



OsWRKY23

1.285

0.361

9.387

2.11E-02



OsWRKY101

1.420

0.506

6.734

2.11E-02



OsWRKY110

1.363

0.447

8.469

6.05E-02



OsWRKY100

0.757

-0.402

13.468

6.65E-02



OsWRKY38

0.713

-0.488

7.540

6.92E-02


List of OsWRKY genes differentially-expressed in the tested experimental conditions with a corrected (False discovery rate) P-value < 0.05 (grey entries indicate a P-value < 0.1). Trm indicated the applied stress treatment. R indicates the ratio of expression levels between treated and control RNA samples. M indicates log2(R). A indicates log2 of the average intensity signal from microarray experiment among technical and biological replicates. Genes highlighted in bold are differentially-regulated in three or more experimental conditions.

Berri et al. BMC Plant Biology 2009 9:120   doi:10.1186/1471-2229-9-120

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