Table 1

Selected reference genes used for gene expression studies in Brachypodium

Gene symbol
Gene name
Brachypodium
Rice
Arabidopsis

ACT7
Actin 7
DV478555
LOC_Os10g36650
AT5G09810
EF1α
Elongation factor 1-alpha
DV482887
LOC_Os03g08050
AT5G60390
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase
DV482924
LOC_Os08g03290
AT3G04120
RCA
Rubisco activase
DV482669
LOC_Os11g47970
AT2G39730
SamDC
S-adenosyl methionine decarboxylase
DV482676
LOC_Os04g42090
AT3G25570
TUA6
Tubulin alpha-6
DV478602
LOC_Os11g14220
AT4G14960
UBC18
Ubiquitin-conjugating enzyme 18
DV481689
LOC_Os12g44000
AT5G42990
Ubi4
Polyubiquitin (Ubi4)
DV482834
LOC_Os04g53620
AT5G20620
Ubi10
Polyubiquitin (Ubi10)
DV484269
LOC_Os06g46770
AT4G05320

The Brachypodium gene accession numbers refer to the dbEST division of GenBank [25]. The Arabidopsis Genome Initiative (AGI) codes and the TIGR rice genome locus identifiers of the gene homologues are also listed.

Hong et al. BMC Plant Biology 2008 8:112   doi:10.1186/1471-2229-8-112