Table 1

Summary of the ESTs generated from the 12 grape SSH libraries.

Group Category

Lib I.D.

Library description

Total ESTs sequenced

Contigs

Singletons

Non-redundant ESTs

Redundant (%)

Unique (%)


RI

1

infected leaf R

487

89

15

104

78.64

21.36

2

infected stem R

504

177

114

291

42.26

57.74

9

Infected shoot R

404

72

45

117

71.04

28.96

RC

4

non-infected leaf R

324

95

28

123

62.04

37.96

5

non-infected stem R

586

175

79

254

56.66

43.34

11

non-infected shoot R

415

170

139

309

25.54

74.46

SI

7

infected leaf S

611

86

32

118

80.69

19.31

3

Infected stem S

290

90

23

113

61.03

38.97

12

Infected shoot S

446

160

136

296

33.63

66.37

SC

8

non-infected leaf S

589

155

160

315

46.52

53.48

6

non-infected stem S

715

233

150

383

46.43

53.57

10

non-infected shoot S

423

59

28

87

79.43

20.57

Total

5794

1561

949

Unique

993


The percent unique and redundant ESTs was calculated for each library. Resistant and susceptible genotypes are tagged with "R" and "S" for library description.

Lin et al. BMC Plant Biology 2007 7:8   doi:10.1186/1471-2229-7-8

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