Table 5 |
||||||
|
Editing sites in Cuscuta reflexa and Cuscuta gronovii |
||||||
|
C. reflexa |
C. gronovii |
|||||
|
|
||||||
|
gene |
pos. |
cons. |
codon |
codon |
||
|
|
||||||
|
accD |
258/173 |
L |
tCg |
S > L |
tta |
L |
|
atpF |
31 |
L |
cCa |
P > L |
ctt |
L |
|
petB |
140 |
W |
Cgg |
R > W |
tgg |
W |
|
204 |
L |
cCa |
P > L |
cta |
L |
|
|
petL |
2 |
L |
ctt |
L |
cct |
P |
|
psbE |
72 |
S |
Cct |
P > S |
cct |
P |
|
psbL |
1 |
M |
aCg |
T > M |
aCg |
T > M |
|
rpl20 |
103 |
L |
tca |
S |
tca |
S |
|
rpoB |
113 |
L |
tCt |
S > F* |
not encoded |
|
|
158 |
L |
tCa |
S > L* |
|||
|
184 |
L |
tCa |
S > L* |
|||
|
189 |
L |
tCg |
S > L |
|||
|
667 |
F |
tCt |
S > F |
|||
|
rpoC1 |
21 |
L |
tCg |
S > L* |
||
|
rps2 |
45 |
I |
aCa |
T > I |
aCa |
T > I * |
|
83 |
L |
tca |
S |
gca |
A |
|
|
rps14 |
27 |
L |
tCa |
S > L |
tCa |
S > L* |
|
50 |
L |
tCa |
S > L |
tCa |
S > L |
|
|
|
||||||
|
'pos.': amino acid position within the gene; 'cons.': conserved amino acid at this position; upper-case 'C' indicates the editing site; bold indicates that the ratio of edited vs. unedited transcripts depends on photosynthetic activity. |
||||||
|
Funk et al. BMC Plant Biology 2007 7:45 doi:10.1186/1471-2229-7-45 |
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