Additional file 4.

Cladogram of LcAOX1 and AOXs from other plant species. The cladogram was constructed with the neighbor-joining method using the MEGA software with default settings. Numbers at the nodes indicate bootstrap values. A scale of distance was shown at the bottom. The deduced amino acid sequences of plant AOXs were obtained from the following sources, with their GenBank accession numbers enclosed in parentheses: Nicotiana glutinosa, NgAOX1a (ABU24346.1); Solanum tuberosum, StAOX (BAE92716.1); Arabidopsis thaliana, AtAOX1A (NP_188876.1), and AtAOX1B (NP_188875.1); Citrus sinensis, CsAOX (ACE95101.1); Vigna unguiculata, VuAOX1 (AAZ09196.1); Gossypium hirsutum, GhAOX (ABJ98721.1); Populus tremula x Populus tremuloides, PtAOX (CAB64356.1); Daucus carota, DcAOX1a (ABZ81227.2); Nelumbo nucifera, NnAOX1a (BAH56640.1); Glycine max, GmAOX1 (NP_001236166.1); Oryza sativa, OsAOX (BAA28774.1); Triticum aestivum, TaAOX (BAB88645.1); and Zea mays, ZmAOX (NP_001105180.1).

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Wang et al. BMC Plant Biology 2013 13:55   doi:10.1186/1471-2229-13-55