Table 1

Summary of trimming and alignment
Samples Raw reads Trimmed reads Mapped reads (%, mapped/trimmed) Uniquely mapped reads (%, unique/trimmed) Uniquely mapped reads in genes (%, in genes/unique)
S15 22,449,515 20,907,381 16,987,823 4,078,452 2,879,805
(81.3%) (19.5%) (70.6%)
S21 19,673,902 18,922,999 14,712,171 3,950,666 2,801,575
(77.7%) (20.9%) (70.9%)
S27 14,104,109 13,104,891 11,217,261 2,405,976 1,577,049
(85.6%) (18.4%) (65.5%)
Total 56,227,526 52,935,271 42,917,255 10,435,094 7,258,429
(81.1%) (19.7%) (69.6%)

Teoh et al.

Teoh et al. BMC Plant Biology 2013 13:19   doi:10.1186/1471-2229-13-19

Open Data