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Open Access Research article

Plasticity of primary and secondary growth dynamics in Eucalyptus hybrids: a quantitative genetics and QTL mapping perspective

Jérôme Bartholomé12, Frédéric Salmon3, Philippe Vigneron45, Jean-Marc Bouvet3, Christophe Plomion2 and Jean-Marc Gion12*

Author Affiliations

1 CIRAD, UMR AGAP, F-33612 Cestas, France

2 INRA, UMR BIOGECO, F-33612 Cestas, France

3 CIRAD, UMR AGAP, F-34398 Montpellier, France

4 CIRAD, UMR AGAP, Pointe Noire, Congo

5 CRDPI, BP 1291 Pointe Noire, Rep. of Congo

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BMC Plant Biology 2013, 13:120  doi:10.1186/1471-2229-13-120

Published: 26 August 2013

Abstract

Background

The genetic basis of growth traits has been widely studied in forest trees. Quantitative trait locus (QTL) studies have highlighted the presence of both stable and unstable genomic regions accounting for biomass production with respect to tree age and genetic background, but results remain scarce regarding the interplay between QTLs and the environment. In this study, our main objective was to dissect the genetic architecture of the growth trajectory with emphasis on genotype x environment interaction by measuring primary and secondary growth covering intervals connected with environmental variations.

Results

Three different trials with the same family of Eucalyptus urophylla x E. grandis hybrids (with different genotypes) were planted in the Republic of Congo, corresponding to two QTL mapping experiments and one clonal test. Height and radial growths were monitored at regular intervals from the seedling stage to five years old. The correlation between growth increments and an aridity index revealed that growth before two years old (r = 0.5; 0.69) was more responsive to changes in water availability than late growth (r = 0.39; 0.42) for both height and circumference. We found a regular increase in heritability with time for cumulative growth for both height [0.06 - 0.33] and circumference [0.06 - 0.38]. Heritabilities for incremental growth were more heterogeneous over time even if ranges of variation were similar (height [0-0.31]; circumference [0.19 to 0.48]). Within the trials, QTL analysis revealed collocations between primary and secondary growth QTLs as well as between early growth increments and final growth QTLs. Between trials, few common QTLs were detected highlighting a strong environmental effect on the genetic architecture of growth, validated by significant QTL x E interactions.

Conclusion

These results suggest that early growth responses to water availability determine the genetic architecture of total growth at the mature stage and highlight the importance of considering growth as a composite trait (such as yields for annual plants) for a better understanding of its genetic bases.

Keywords:
Growth; Growth modelling; Plasticity; QTL x E interaction; Heritability; Eucalyptus