Table 1

Statistics of DGE sequencing

Summary

Daye3bianzhong

Yongan1hao

Yongan2hao

Yongan3hao

Yongan4hao


Total Reads

11769284

11889409

11111041

12447409

12067757

Total Mapped Reads

3148437(26.75%)

3427726(28.83%)

2946873(26.52%)

3749087(30.12%)

3784412(31.36%)

perfect match

2340718(19.89%)

2743445(23.07%)

2344512(21.1%)

2934783(23.58%)

2872592(23.8%)

< = 2 bp mismatch

807719(6.86%)

684281(5.76%)

602361(5.42%)

814304(6.54%)

911820(7.56%)

unique match

3116463(26.48%)

3390730(28.52%)

2924115(26.32%)

3733720(30%)

3767740(31.22%)

multi-position match

31974(0.27%)

36996(0.31%)

22758(0.2%)

15367(0.12%)

16672(0.14%)

Total Unmapped Reads

8620847(73.25%)

8461683(71.17%)

8164168(73.48%)

8698322(69.88%)

8283345(68.64%)


Sun et al. BMC Plant Biology 2012 12:53   doi:10.1186/1471-2229-12-53

Open Data