Table 1 |
|||
| Overview about BLAST analyses in OPTIMAS-DW | |||
| BLAST type | Query database | Hit database | Entries in hit database |
| BLASTX | Maize Genome 3b.50 | NCBI non redundant Peptides | 7,987,196 proteins |
| BLASTN | Maize Genome 3b.50 | NCBI Zea mays Unigene Build 75 | 82,630 ESTs |
| BLASTN | Maize Genome 3b.50 | EMBL fungi ESTs | 2,028,363 ESTs |
| BLASTX | Maize Genome 4a.53 | NCBI non redundant Peptides | 7,987,196 proteins |
| (used for Blast2Go) | |||
| BLASTX | OPTIMAS Oligo Set | Uniref, version 2011-09-21 | |
Colmsee et al. BMC Plant Biology 2012 12:245 doi:10.1186/1471-2229-12-245
