Table 3

qRT PCR validation of microarray results
Schematic Name Microarray Result qRT-PCR-Result Target Gene
Redox Activity and Metalloenzyme Activity
contig 816 2.7 increase 2.6 increase GSPD-816 (glyceraldehyde 3-phosphate dehydrogenase, cytosolic)
contig 3096 2.3 increase 2.6 increase ASP (peroxisome type ascorbate peroxidase)
contig 119 2.7 increase 2.3 increase CSD2 (copper/zinc dismutase 2)
Metalloenzyme Activity
contig 180 1.95 increase 3.5 increase MET (metallothionein)
Vitamin C Biosynthesis and Antioxidant Activity
contig 3096 2.3 increase 2.6 increase ASP (ascorbate peroxidase, peroxisome type)
contig 119 2.7 increase 2.3 increase CSD2 (copper/zinc dismutase 2)
contig 3227 1.5 increase 2.1 increase GPP (L-galactose-1-phosphate phosphatase)
Organic Acid Metabolism
contig 816 2.7 increase 2.6 increase GSPD-816 (glyceraldehyde 3-phosphate dehydrogenase, cytosolic)
contig 604 8.5 increase 5.0 increase MGS (monogalactosyldiacylglycerol synthase)
Stress Related
contig 35 6.3 decrease 4.5 decrease GAST (GAST-like protein)
Cysteine-Type Peptidase and Ubiquitin Proteolysis
contig 122 31.7 decrease 20.6 decrease Ac-122 (Fruit Bromelain Ac-122)
contig 756 4.5 decrease 2.0 increase OTU (OTU-like cysteine protease family protein)
contig 1299 3.1 increase 2.1 increase UBE2A (Ubiquitin conjugating protein)

Koia et al.

Koia et al. BMC Plant Biology 2012 12:240   doi:10.1186/1471-2229-12-240

Open Data