Table 1

List of pineapple ESTs from KEGG pathway maps with contig ID numbers (http://www.pgel.com.au webcite), Arabidopsis ID tag, normalized expression value and annotated gene description
Schematic Name Arabidopsis homologue CloneID Normalized Expression Levels Description

KEGG

ID

Glycolysis - KEGG PATHWAY
contig 763 At3g04120 4.1 Glyceraldehyde 3-phosphate dehydrogenase, cytosolic Ac763
contig 251 At4g33070 3.4 Pyruvate decarboxylase 1 Ac251
contig 30 At2g36530 2.3 Enolase Ac30
contig 1110 At1g77120 2.1 Alcohol dehydrogenase Ac1110
contig 3191 At3g55440 2.1 Triose-phosphate isomerase Ac3191
contig 441 At1g09780 1.6 Phosphoglycerate mutase Ac441
Cysteine and Methionine Metabolism
contig 3189 At4g14880 2.3 Cysteine synthase Ac3189
contig 117 At4g14710 1.7 ATARD2 acireductone dioxygenase2 Ac117
contig 113 At3g25570 1.6 S-adenosylmethionine decarboxylase Ac113
contig 1009 At5g11520 1.5 Aspartate aminotransferase Ac1009
contig 3350 At4g19710 1.5 Bifunctional aspartokinase/homoserine dehydrogenase Ac3350
Ubiquitin-Mediated Proteolysis - KEGG Pathway
contig 1299 At2g02760 3.1 Ubiquitin conjugating protein UBE2A
contig 154 At1g16890 1.6 Ubiquitin carrier protein E2 36 UBE2N
contig 861 At5g22920 1.6 Putative PGPD14 protein (pollen germination related protein) PIRH2
contig 1793 At5g42190 1.5 SKP1-like protein 1B SKP1
contig 1433 At1g64230 −2.0 Ubiquitin carrier protein E2 28 UBE2D_E
contig 153 At3g57870 −2.2 Ubiquitin carrier protein UBE2I

Koia et al.

Koia et al. BMC Plant Biology 2012 12:240   doi:10.1186/1471-2229-12-240

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